Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructoselysine 6-kinase | DFR47_1218 | Not Available | Negative | 4579046 - 4579888 | 30272.9 |
| fructoselysine 6-phosphate deglycase | DFR47_1219 | Not Available | Positive | 4580001 - 4581002 | 37439.0 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | DFR47_12110 | Not Available | Positive | 4581101 - 4582120 | 37020.6 |
| trap-type c4-dicarboxylate transport system permease small subunit | DFR47_12111 | Not Available | Positive | 4582289 - 4582780 | 17719.5 |
| tripartite atp-independent transporter dctm subunit | DFR47_12112 | Not Available | Positive | 4582774 - 4584048 | 45461.7 |
| ornithine cyclodeaminase | DFR47_12113 | Not Available | Positive | 4584062 - 4585000 | 33972.0 |
| putative transposase | DFR47_12114 | Not Available | Positive | 4585200 - 4585463 | 9978.18 |
| hypothetical protein | DFR47_1221 | Not Available | Positive | 4585762 - 4585869 | 3995.91 |
| hypothetical protein | DFR47_1222 | Not Available | Positive | 4585904 - 4586491 | 22718.3 |
| choline dehydrogenase-like flavoprotein | DFR47_1223 | Not Available | Negative | 4586787 - 4588406 | 57976.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
