Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna m(5)u-1939 methyltransferase | DFR47_101215 | Not Available | Positive | 239610 - 240839 | 44329.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | DFR47_101216 | Not Available | Negative | 240910 - 241659 | 26432.7 |
| microcin-processing peptidase 2 | DFR47_101217 | Not Available | Negative | 241662 - 243089 | 50689.9 |
| invasion protein ialb | DFR47_101218 | Not Available | Negative | 243247 - 243807 | 19477.6 |
| cytochrome c oxidase subunit 2 | DFR47_101219 | Not Available | Positive | 244523 - 245503 | 35962.3 |
| cytochrome c oxidase subunit 1 | DFR47_101220 | Not Available | Positive | 245692 - 247374 | 61787.9 |
| protoheme ix farnesyltransferase | DFR47_101221 | Not Available | Positive | 247718 - 248671 | 34265.8 |
| hypothetical protein | DFR47_101222 | Not Available | Positive | 248674 - 248850 | 6378.06 |
| cytochrome c oxidase assembly protein subunit 11 | DFR47_101223 | Not Available | Positive | 248897 - 249574 | 24797.7 |
| cytochrome c oxidase subunit 3 | DFR47_101224 | Not Available | Positive | 249797 - 250675 | 33308.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
