Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase ii /3,4-dihydroxy-2-butanone 4-phosphate synthase | DFR47_101205 | Not Available | Positive | 231130 - 232236 | 40663.7 |
| acetoin utilization deacetylase acuc-like enzyme | DFR47_101206 | Not Available | Positive | 232419 - 233381 | 34827.9 |
| exodeoxyribonuclease vii small subunit | DFR47_101207 | Not Available | Positive | 233385 - 233654 | 9908.61 |
| variant sh3 domain-containing protein | DFR47_101208 | Not Available | Negative | 233713 - 234051 | 12564.6 |
| membrane protein deda with snare-associated domain | DFR47_101209 | Not Available | Negative | 234062 - 234559 | 18236.8 |
| putative membrane protein yeaq/ymge (transglycosylase-associated protein family) | DFR47_101210 | Not Available | Negative | 234578 - 234838 | 8908.42 |
| uncharacterized protein yidb (duf937 family) | DFR47_101211 | Not Available | Positive | 235080 - 235619 | 17719.0 |
| hypothetical protein | DFR47_101212 | Not Available | Positive | 235740 - 236675 | 34805.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DFR47_101213 | Not Available | Positive | 236781 - 238721 | 69171.6 |
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | DFR47_101214 | Not Available | Positive | 238831 - 239610 | 27804.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
