Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminomethyltransferase | DFR47_11072 | Not Available | Positive | 4089963 - 4091078 | 39747.7 |
| glycine cleavage system h protein | DFR47_11073 | Not Available | Positive | 4091083 - 4091451 | 13134.5 |
| glycine dehydrogenase (decarboxylating) alpha subunit /glycine dehydrogenase (decarboxylating) beta subunit | DFR47_11074 | Not Available | Positive | 4091455 - 4094259 | 100300.0 |
| d-serine/d-alanine/glycine:proton symporter (aat family) | DFR47_11075 | Not Available | Positive | 4094529 - 4095920 | 50423.2 |
| putative murein hydrolase (tigr00659 family) | DFR47_11076 | Not Available | Negative | 4095960 - 4096673 | 25717.2 |
| holin-like protein | DFR47_11077 | Not Available | Negative | 4096670 - 4097089 | 15155.3 |
| dna-binding transcriptional lysr family regulator | DFR47_11078 | Not Available | Positive | 4097197 - 4098075 | 32554.5 |
| glutaryl-coa dehydrogenase | DFR47_11079 | Not Available | Positive | 4098264 - 4099451 | 43556.3 |
| crotonobetainyl-coa:carnitine coa-transferase caib-like acyl-coa transferase | DFR47_11080 | Not Available | Positive | 4099551 - 4100693 | 41211.6 |
| oligopeptide transport system substrate-binding protein | DFR47_11081 | Not Available | Positive | 4101114 - 4102706 | 58937.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
