Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family glycine cleavage system transcriptional activator | DFR47_109113 | Not Available | Positive | 4013441 - 4014328 | 32158.7 |
| iron(iii) transport system permease protein | DFR47_109114 | Not Available | Negative | 4014325 - 4015977 | 59503.1 |
| iron(iii) transport system substrate-binding protein | DFR47_109115 | Not Available | Negative | 4016243 - 4017265 | 36474.5 |
| iron(iii) transport system atp-binding protein | DFR47_109116 | Not Available | Negative | 4017475 - 4018560 | 39685.4 |
| uncharacterized protein yeao (duf488 family) | DFR47_109117 | Not Available | Positive | 4018701 - 4019069 | 14379.0 |
| meso-butanediol dehydrogenase/(s,s)-butanediol dehydrogenase/diacetyl reductase | DFR47_109118 | Not Available | Positive | 4019261 - 4020040 | 27518.9 |
| 2-keto-3-deoxygluconate kinase | DFR47_109119 | Not Available | Negative | 4020094 - 4020987 | 32303.2 |
| d-serine deaminase-like pyridoxal phosphate-dependent protein | DFR47_109120 | Not Available | Negative | 4020996 - 4022078 | 38814.4 |
| peptide/nickel transport system substrate-binding protein | DFR47_109121 | Not Available | Positive | 4022296 - 4023825 | 55912.4 |
| peptide/nickel transport system permease protein | DFR47_109122 | Not Available | Positive | 4023905 - 4024846 | 33819.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
