Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DFR47_10983 | Not Available | Negative | 3975361 - 3978492 | 118274.0 |
| pyridoxamine 5'-phosphate oxidase | DFR47_10984 | Not Available | Negative | 3978702 - 3979373 | 25119.8 |
| lysr family transcriptional regulator | DFR47_10985 | Not Available | Negative | 3979404 - 3980267 | 31836.8 |
| amino acid abc transporter substrate-binding protein (paat family) | DFR47_10986 | Not Available | Positive | 3980463 - 3981314 | 30724.9 |
| threonine dehydratase | DFR47_10987 | Not Available | Positive | 3981354 - 3982325 | 33722.4 |
| n-alpha-acetyl-l-2,4-diaminobutyrate deacetylase | DFR47_10988 | Not Available | Positive | 3982344 - 3983336 | 35763.8 |
| ornithine cyclodeaminase | DFR47_10989 | Not Available | Positive | 3983444 - 3984403 | 34007.8 |
| iron complex outermembrane receptor protein | DFR47_10990 | Not Available | Positive | 3984561 - 3986771 | 82599.0 |
| iron complex transport system substrate-binding protein | DFR47_10991 | Not Available | Positive | 3986765 - 3987742 | 35842.2 |
| iron complex transport system permease protein | DFR47_10992 | Not Available | Positive | 3987742 - 3988731 | 34023.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
