Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-arginine dehydrogenase | DFR47_10963 | Not Available | Positive | 3948720 - 3949841 | 39920.6 |
| creatinine amidohydrolase | DFR47_10964 | Not Available | Positive | 3949896 - 3950726 | 29753.7 |
| dipeptide transport system substrate-binding protein | DFR47_10965 | Not Available | Positive | 3950755 - 3952374 | 59640.0 |
| rpir family transcriptional regulator | DFR47_10966 | Not Available | Negative | 3952488 - 3953342 | 31680.8 |
| hypothetical protein | DFR47_10967 | Not Available | Positive | 3953490 - 3953933 | 16339.8 |
| peptide/nickel transport system substrate-binding protein | DFR47_10968 | Not Available | Positive | 3953930 - 3955075 | 42425.2 |
| peptide/nickel transport system permease protein | DFR47_10969 | Not Available | Positive | 3955084 - 3956010 | 32985.6 |
| peptide/nickel transport system permease protein | DFR47_10970 | Not Available | Positive | 3956007 - 3956861 | 30061.6 |
| peptide/nickel transport system atp-binding protein | DFR47_10971 | Not Available | Positive | 3956863 - 3957816 | 34062.9 |
| oligopeptide transport system atp-binding protein | DFR47_10972 | Not Available | Positive | 3957813 - 3958787 | 36112.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
