Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter membrane protein 2 (paat family) | DFR47_10943 | Not Available | Negative | 3932573 - 3933298 | 26711.3 |
| amino acid abc transporter membrane protein 1 (paat family) | DFR47_10944 | Not Available | Negative | 3933300 - 3934019 | 25870.3 |
| amino acid abc transporter substrate-binding protein (paat family) | DFR47_10945 | Not Available | Negative | 3934170 - 3935012 | 30132.2 |
| cytosine/adenosine deaminase-related metal-dependent hydrolase | DFR47_10946 | Not Available | Negative | 3935014 - 3936525 | 56127.1 |
| octopine/nopaline transport system substrate-binding protein | DFR47_10947 | Not Available | Negative | 3936620 - 3937471 | 30566.7 |
| cytosine/adenosine deaminase-related metal-dependent hydrolase | DFR47_10948 | Not Available | Negative | 3937510 - 3938712 | 43165.0 |
| quercetin dioxygenase-like cupin family protein | DFR47_10949 | Not Available | Positive | 3939449 - 3939955 | 18525.0 |
| thioredoxin reductase (nadph) | DFR47_10950 | Not Available | Positive | 3939989 - 3940948 | 34077.0 |
| thioredoxin | DFR47_10951 | Not Available | Positive | 3940979 - 3941305 | 11848.3 |
| putative glutamine amidotransferase | DFR47_10952 | Not Available | Positive | 3941511 - 3942368 | 31795.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
