Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system permease protein | DFR47_10913 | Not Available | Negative | 3896830 - 3897609 | 28152.4 |
| putative spermidine/putrescine transport system permease protein | DFR47_10914 | Not Available | Negative | 3897611 - 3898789 | 43650.3 |
| putative spermidine/putrescine transport system substrate-binding protein | DFR47_10915 | Not Available | Negative | 3898868 - 3899899 | 38140.4 |
| tetr family transcriptional regulator | DFR47_10916 | Not Available | Negative | 3899931 - 3900581 | 24291.3 |
| uncharacterized protein duf2218 | DFR47_10917 | Not Available | Positive | 3901858 - 3902334 | 18490.6 |
| lrp/asnc family leucine-responsive transcriptional regulator | DFR47_10918 | Not Available | Negative | 3903230 - 3903874 | 24236.7 |
| l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase | DFR47_10919 | Not Available | Positive | 3903879 - 3907562 | 131939.0 |
| arac family transcriptional regulator | DFR47_10920 | Not Available | Negative | 3909496 - 3910260 | 28367.0 |
| acetyl esterase | DFR47_10921 | Not Available | Positive | 3910426 - 3911388 | 34994.2 |
| paib family negative transcriptional regulator | DFR47_10922 | Not Available | Positive | 3911411 - 3912019 | 22863.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
