Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter substrate-binding protein (haat family) | DFR47_10770 | Not Available | Negative | 3626793 - 3627947 | 40733.9 |
| phenylacetic acid degradation protein paan | DFR47_10771 | Not Available | Negative | 3627971 - 3629614 | 58753.7 |
| short chain enoyl-coa hydratase /enoyl-coa hydratase | DFR47_10772 | Not Available | Positive | 3629724 - 3630512 | 27874.3 |
| acyl-coa thioesterase | DFR47_10773 | Not Available | Positive | 3630509 - 3630952 | 15982.8 |
| phenylacetate-coa ligase | DFR47_10774 | Not Available | Positive | 3630983 - 3632293 | 48949.9 |
| tetr family transcriptional regulator | DFR47_10775 | Not Available | Positive | 3632407 - 3633006 | 22785.5 |
| oxepin-coa hydrolase/3-oxo-5,6-dehydrosuberyl-coa semialdehyde dehydrogenase | DFR47_10776 | Not Available | Negative | 3633194 - 3635266 | 74470.0 |
| 1,2-phenylacetyl-coa epoxidase catalytic subunit | DFR47_10777 | Not Available | Negative | 3635316 - 3636068 | 27767.2 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paae | DFR47_10778 | Not Available | Negative | 3636080 - 3637156 | 39820.6 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paad | DFR47_10779 | Not Available | Negative | 3637301 - 3637822 | 19187.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
