Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-anchoring transpeptidase erfk/srfk | DFR47_106217 | Not Available | Positive | 3546137 - 3547555 | 50817.8 |
| murein dd-endopeptidase mepm/ murein hydrolase activator nlpd | DFR47_106218 | Not Available | Negative | 3547616 - 3549598 | 72223.1 |
| arsr family transcriptional regulator | DFR47_1071 | Not Available | Negative | 3550724 - 3551383 | 24491.5 |
| putative mfs family arabinose efflux permease | DFR47_1072 | Not Available | Positive | 3551465 - 3552664 | 41930.3 |
| hypothetical protein | DFR47_1073 | Not Available | Negative | 3552719 - 3554593 | 69527.7 |
| peptide/nickel transport system substrate-binding protein | DFR47_1074 | Not Available | Negative | 3554590 - 3556173 | 57341.1 |
| oligopeptide/dipeptide abc transporter atp-binding protein | DFR47_1075 | Not Available | Negative | 3556170 - 3557216 | 38561.6 |
| oligopeptide/dipeptide abc transporter atp-binding protein | DFR47_1076 | Not Available | Negative | 3557216 - 3558247 | 36874.4 |
| peptide/nickel transport system permease protein | DFR47_1077 | Not Available | Negative | 3558244 - 3559143 | 32042.5 |
| peptide/nickel transport system permease protein | DFR47_1078 | Not Available | Negative | 3559143 - 3560111 | 35081.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
