Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic-di-gmp-binding biofilm dispersal mediator protein | DFR47_105175 | Not Available | Negative | 3284694 - 3285407 | 24545.5 |
| thymidine phosphorylase | DFR47_105176 | Not Available | Negative | 3285500 - 3286813 | 45326.8 |
| purine-nucleoside phosphorylase | DFR47_105177 | Not Available | Negative | 3286857 - 3287666 | 28467.6 |
| cytidine deaminase | DFR47_105178 | Not Available | Negative | 3287671 - 3288063 | 14058.0 |
| nucleoside abc transporter membrane protein | DFR47_105179 | Not Available | Negative | 3288240 - 3289211 | 33950.4 |
| nucleoside abc transporter membrane protein | DFR47_105180 | Not Available | Negative | 3289217 - 3290350 | 40568.2 |
| nicotinamidase-related amidase | DFR47_105181 | Not Available | Negative | 3290347 - 3290904 | 20440.3 |
| nucleoside abc transporter atp-binding protein | DFR47_105182 | Not Available | Negative | 3290901 - 3292463 | 56595.9 |
| slyx protein | DFR47_105183 | Not Available | Positive | 3292823 - 3293035 | 8144.63 |
| nucleoside-binding protein | DFR47_105184 | Not Available | Negative | 3293107 - 3294099 | 34943.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
