Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef)-like protein | DFR47_105165 | Not Available | Positive | 3271747 - 3272868 | 41392.7 |
| endonuclease/exonuclease/phosphatase family metal-dependent hydrolase | DFR47_105166 | Not Available | Positive | 3273000 - 3273851 | 31574.1 |
| cardiolipin synthase | DFR47_105167 | Not Available | Negative | 3273842 - 3275314 | 54122.7 |
| uncharacterized membrane protein hded (duf308 family) | DFR47_105168 | Not Available | Positive | 3275569 - 3276138 | 20341.8 |
| peptide chain release factor 3 (brf-3) | DFR47_105169 | Not Available | Positive | 3276272 - 3277861 | 59502.1 |
| ammonium transporter | DFR47_105170 | Not Available | Negative | 3277956 - 3279275 | 45412.2 |
| phosphopantothenate-cysteine ligase /phosphopantothenoylcysteine decarboxylase | DFR47_105171 | Not Available | Negative | 3279577 - 3280956 | 49080.4 |
| 2-octaprenylphenol hydroxylase | DFR47_105172 | Not Available | Negative | 3281043 - 3282611 | 58196.0 |
| 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase /demethylmenaquinone methyltransferase | DFR47_105173 | Not Available | Negative | 3282709 - 3283536 | 30607.2 |
| uracil phosphoribosyltransferase | DFR47_105174 | Not Available | Positive | 3283948 - 3284574 | 23099.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
