Pseudochrobactrum asaccharolyticum str. DSM 25619

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Brucellaceae

Genus

Pseudochrobactrum

Description

Pseudochrobactrum asaccharolyticum str. DSM 25619 is a Gram-negative, non-spore-forming rod-shaped bacterium. This species is characterized by its unique metabolic capabilities, particularly its inability to utilize saccharolytic substrates, which distinguishes it from other members of the genus Pseudochrobactrum. The Gram-negative nature of this bacterium suggests the presence of an outer membrane containing lipopolysaccharides, contributing to its structural integrity and potential responses to environmental stressors. The rod shape of P. asaccharolyticum str. DSM 25619 may influence its motility and interaction with the surrounding environment, which is particularly relevant in microbial communities where spatial arrangement and physical characteristics can affect ecological interactions. The non-spore-forming trait indicates that this bacterium does not produce spores for survival under adverse conditions, suggesting it may rely on other mechanisms for resilience and adaptation. Given these traits, Pseudochrobactrum asaccharolyticum str. DSM 25619 may play a specific role in its ecological niche, potentially engaging in interactions with other microorganisms that utilize different metabolic pathways. This relationship may allow for the recycling of organic matter and nutrients in its environment, highlighting the importance of such bacteria in maintaining microbial diversity and ecosystem function. Understanding the metabolic and structural characteristics of P. asaccharolyticum str. DSM 25619 may provide insights into its ecological role and functional significance within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyBrucellaceae
GenusPseudochrobactrum
SpeciesPseudochrobactrum asaccharolyticum
StrainDSM 25619

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcrude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudochrobactrum asaccharolyticum strain DSM 25619 Ga0244562_139,

Gene Summary

Adenine Count

1130965 bp

Thymine Count

1155614 bp

Guanine Count

1200445 bp

Cytosine Count

1161986 bp

Genome Length

4649592 bp

Protein-coding Genes

4141 genes

Non-Coding Genes

188 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetratricopeptide repeat proteinDFR47_105105Not AvailableNegative3209469 - 321032631332.4
ssu ribosomal protein s21pDFR47_105106Not AvailableNegative3210742 - 32109728873.0
sarcosine oxidase subunit betaDFR47_105107Not AvailablePositive3211530 - 321278345560.4
sarcosine oxidase subunit deltaDFR47_105108Not AvailablePositive3212800 - 321312612511.7
sarcosine oxidase subunit alphaDFR47_105109Not AvailablePositive3213123 - 3216116108604.0
sarcosine oxidase subunit gammaDFR47_105110Not AvailablePositive3216109 - 321666619767.5
hypothetical proteinDFR47_105111Not AvailablePositive3216848 - 321801444212.1
acyl dehydrataseDFR47_105112Not AvailableNegative3218254 - 321872417148.7
had superfamily hydrolase (tigr01509 family)DFR47_105113Not AvailableNegative3218756 - 321942723958.5
putative homoserine dehydrogenase-like proteinDFR47_105114Not AvailablePositive3219558 - 322087746418.5

Displaying genes 3051 – 3060 of 4329 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.