Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DFR47_105105 | Not Available | Negative | 3209469 - 3210326 | 31332.4 |
| ssu ribosomal protein s21p | DFR47_105106 | Not Available | Negative | 3210742 - 3210972 | 8873.0 |
| sarcosine oxidase subunit beta | DFR47_105107 | Not Available | Positive | 3211530 - 3212783 | 45560.4 |
| sarcosine oxidase subunit delta | DFR47_105108 | Not Available | Positive | 3212800 - 3213126 | 12511.7 |
| sarcosine oxidase subunit alpha | DFR47_105109 | Not Available | Positive | 3213123 - 3216116 | 108604.0 |
| sarcosine oxidase subunit gamma | DFR47_105110 | Not Available | Positive | 3216109 - 3216666 | 19767.5 |
| hypothetical protein | DFR47_105111 | Not Available | Positive | 3216848 - 3218014 | 44212.1 |
| acyl dehydratase | DFR47_105112 | Not Available | Negative | 3218254 - 3218724 | 17148.7 |
| had superfamily hydrolase (tigr01509 family) | DFR47_105113 | Not Available | Negative | 3218756 - 3219427 | 23958.5 |
| putative homoserine dehydrogenase-like protein | DFR47_105114 | Not Available | Positive | 3219558 - 3220877 | 46418.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
