Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit delta | DFR47_10595 | Not Available | Negative | 3197182 - 3197412 | 8526.4 |
| formate dehydrogenase alpha subunit | DFR47_10596 | Not Available | Negative | 3197416 - 3200301 | 105870.0 |
| formate dehydrogenase beta subunit | DFR47_10597 | Not Available | Negative | 3200314 - 3201882 | 55476.9 |
| formate dehydrogenase gamma subunit | DFR47_10598 | Not Available | Negative | 3201879 - 3202427 | 19568.4 |
| transcriptional regulator | DFR47_10599 | Not Available | Negative | 3202512 - 3203411 | 33020.3 |
| penicillin-binding protein 1c | DFR47_105100 | Not Available | Positive | 3203512 - 3205632 | 76762.7 |
| d-methionine transport system substrate-binding protein | DFR47_105101 | Not Available | Positive | 3205997 - 3206848 | 31001.2 |
| d-methionine transport system atp-binding protein | DFR47_105102 | Not Available | Positive | 3206987 - 3208111 | 40171.8 |
| d-methionine transport system permease protein | DFR47_105103 | Not Available | Positive | 3208080 - 3208757 | 24386.0 |
| catechol 2,3-dioxygenase-like lactoylglutathione lyase family enzyme | DFR47_105104 | Not Available | Negative | 3208956 - 3209366 | 14829.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
