Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| badm/rrf2 family transcriptional regulator | DFR47_1051 | Not Available | Positive | 3067604 - 3068017 | 14985.4 |
| zinc transport system substrate-binding protein | DFR47_1052 | Not Available | Negative | 3068024 - 3068974 | 34063.4 |
| zinc transport system atp-binding protein | DFR47_1053 | Not Available | Positive | 3069130 - 3070017 | 32170.5 |
| zinc transport system permease protein | DFR47_1054 | Not Available | Positive | 3070010 - 3070840 | 29798.9 |
| fur family zinc uptake transcriptional regulator | DFR47_1055 | Not Available | Positive | 3070837 - 3071283 | 16417.5 |
| luxr family transcriptional regulator | DFR47_1056 | Not Available | Negative | 3071341 - 3072162 | 30900.7 |
| putative spermidine/putrescine transport system substrate-binding protein | DFR47_1057 | Not Available | Positive | 3072870 - 3073973 | 39391.4 |
| putative spermidine/putrescine transport system permease protein | DFR47_1058 | Not Available | Positive | 3074181 - 3075083 | 33222.3 |
| putative spermidine/putrescine transport system permease protein | DFR47_1059 | Not Available | Positive | 3075080 - 3075883 | 30027.6 |
| putative spermidine/putrescine transport system atp-binding protein | DFR47_10510 | Not Available | Positive | 3075887 - 3076948 | 38648.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
