Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase protein tatb | DFR47_104516 | Not Available | Positive | 3048437 - 3049072 | 22569.2 |
| sec-independent protein translocase tatc | DFR47_104517 | Not Available | Positive | 3049069 - 3049905 | 31340.1 |
| seryl-trna synthetase | DFR47_104518 | Not Available | Positive | 3050064 - 3051344 | 47410.5 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | DFR47_104519 | Not Available | Positive | 3051583 - 3052260 | 25021.1 |
| murein dd-endopeptidase mepm/ murein hydrolase activator nlpd | DFR47_104520 | Not Available | Positive | 3052570 - 3054000 | 49049.0 |
| hypothetical protein | DFR47_104521 | Not Available | Negative | 3054065 - 3054931 | 32391.4 |
| protein translocase subunit yajc | DFR47_104522 | Not Available | Positive | 3055351 - 3055695 | 12581.6 |
| protein translocase subunit secf /protein translocase subunit secd | DFR47_104523 | Not Available | Positive | 3055986 - 3058235 | 80722.6 |
| uncharacterized protein | DFR47_104524 | Not Available | Positive | 3058496 - 3058885 | 13999.9 |
| phytoene synthase | DFR47_104525 | Not Available | Positive | 3058889 - 3059761 | 32175.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
