Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate semialdehyde dehydrogenase | DFR47_104496 | Not Available | Positive | 3025622 - 3027079 | 51865.4 |
| putative phosphonate metabolism protein | DFR47_104497 | Not Available | Positive | 3027426 - 3028202 | 28972.7 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | DFR47_104498 | Not Available | Positive | 3028226 - 3029386 | 41864.6 |
| pp_02711 | DFR47_104499 | Not Available | Negative | 3029560 - 3030606 | Not Available |
| aspartyl protease family protein | DFR47_104500 | Not Available | Negative | 3030770 - 3031474 | 24975.2 |
| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | DFR47_104501 | Not Available | Positive | 3031654 - 3032679 | 35261.6 |
| asnc family transcriptional regulator | DFR47_104502 | Not Available | Negative | 3033029 - 3033508 | 18479.5 |
| uracil-dna glycosylase | DFR47_104503 | Not Available | Negative | 3033630 - 3034316 | 26318.8 |
| endonuclease yncb(thermonuclease family) | DFR47_104504 | Not Available | Negative | 3034422 - 3035081 | 24689.3 |
| hypothetical protein | DFR47_104505 | Not Available | Positive | 3035497 - 3035712 | 7931.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
