Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic amp phosphodiesterase cpda | DFR47_104405 | Not Available | Negative | 2940811 - 2941794 | 36604.2 |
| adp-ribose pyrophosphatase yjhb (nudix family) | DFR47_104406 | Not Available | Positive | 2941984 - 2942439 | 17513.3 |
| carbonic anhydrase/acetyltransferase-like protein (isoleucine patch superfamily) | DFR47_104407 | Not Available | Positive | 2942471 - 2943001 | 18813.7 |
| putative transglutaminase-like cysteine proteinase | DFR47_104408 | Not Available | Negative | 2943098 - 2943790 | 26031.0 |
| pilz domain-containing protein | DFR47_104409 | Not Available | Negative | 2944479 - 2945111 | 23235.5 |
| hypothetical protein | DFR47_104410 | Not Available | Negative | 2945304 - 2946242 | 34502.0 |
| membrane associated rhomboid family serine protease | DFR47_104411 | Not Available | Positive | 2946820 - 2947557 | 26471.1 |
| cbs domain protein | DFR47_104412 | Not Available | Positive | 2947796 - 2948230 | 15891.4 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | DFR47_104413 | Not Available | Negative | 2948308 - 2949198 | 32116.7 |
| Trna-tyr | Not Available | Not Available | Positive | 2949480 - 2949564 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
