Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 2915832 - 2915906 | Not Available |
| uncharacterized protein ycbk (duf882 family) | DFR47_104386 | Not Available | Negative | 2916231 - 2917460 | 43156.4 |
| hypothetical protein | DFR47_104387 | Not Available | Positive | 2917811 - 2918155 | 11809.9 |
| alanine-synthesizing transaminase | DFR47_104388 | Not Available | Positive | 2918354 - 2919547 | 43501.2 |
| homoserine dehydrogenase | DFR47_104389 | Not Available | Positive | 2919650 - 2920969 | 46355.8 |
| atpase subunit of abc transporter with duplicated atpase domains | DFR47_104390 | Not Available | Positive | 2921477 - 2923006 | 56134.8 |
| fructose-1,6-bisphosphatase ii / sedoheptulose-1,7-bisphosphatase | DFR47_104391 | Not Available | Positive | 2923296 - 2924285 | 35170.4 |
| exonuclease recj | DFR47_104392 | Not Available | Positive | 2924637 - 2926445 | 63542.4 |
| lactoylglutathione lyase | DFR47_104393 | Not Available | Negative | 2926482 - 2926922 | 16902.8 |
| putative cold-shock dna-binding protein | DFR47_104394 | Not Available | Positive | 2927147 - 2927728 | 21319.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
