Pseudochrobactrum asaccharolyticum str. DSM 25619

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Brucellaceae

Genus

Pseudochrobactrum

Description

Pseudochrobactrum asaccharolyticum str. DSM 25619 is a Gram-negative, non-spore-forming rod-shaped bacterium. This species is characterized by its unique metabolic capabilities, particularly its inability to utilize saccharolytic substrates, which distinguishes it from other members of the genus Pseudochrobactrum. The Gram-negative nature of this bacterium suggests the presence of an outer membrane containing lipopolysaccharides, contributing to its structural integrity and potential responses to environmental stressors. The rod shape of P. asaccharolyticum str. DSM 25619 may influence its motility and interaction with the surrounding environment, which is particularly relevant in microbial communities where spatial arrangement and physical characteristics can affect ecological interactions. The non-spore-forming trait indicates that this bacterium does not produce spores for survival under adverse conditions, suggesting it may rely on other mechanisms for resilience and adaptation. Given these traits, Pseudochrobactrum asaccharolyticum str. DSM 25619 may play a specific role in its ecological niche, potentially engaging in interactions with other microorganisms that utilize different metabolic pathways. This relationship may allow for the recycling of organic matter and nutrients in its environment, highlighting the importance of such bacteria in maintaining microbial diversity and ecosystem function. Understanding the metabolic and structural characteristics of P. asaccharolyticum str. DSM 25619 may provide insights into its ecological role and functional significance within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyBrucellaceae
GenusPseudochrobactrum
SpeciesPseudochrobactrum asaccharolyticum
StrainDSM 25619

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcrude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudochrobactrum asaccharolyticum strain DSM 25619 Ga0244562_139,

Gene Summary

Adenine Count

1130965 bp

Thymine Count

1155614 bp

Guanine Count

1200445 bp

Cytosine Count

1161986 bp

Genome Length

4649592 bp

Protein-coding Genes

4141 genes

Non-Coding Genes

188 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family)DFR47_10186Not AvailableNegative93782 - 9449226593.9
gr25 family glycosyltransferase involved in lps biosynthesisDFR47_10187Not AvailableNegative94492 - 9523527541.5
hypothetical proteinDFR47_10188Not AvailableNegative95501 - 9584812974.6
pyrroline-5-carboxylate reductaseDFR47_10189Not AvailableNegative96334 - 9714628160.0
hypothetical proteinDFR47_10190Not AvailablePositive97632 - 9824922271.4
methenyltetrahydrofolate cyclohydrolase /5,10-methylenetetrahydrofolate dehydrogenase (nadp+)DFR47_10191Not AvailablePositive98388 - 9930531415.2
acetyltransferase (gnat) family proteinDFR47_10192Not AvailablePositive99400 - 9983716324.4
6-phosphogluconate dehydrataseDFR47_10193Not AvailableNegative99838 - 10165264034.1
6-phosphogluconolactonaseDFR47_10194Not AvailableNegative101947 - 10267226023.1
glucose-6-phosphate 1-dehydrogenaseDFR47_10195Not AvailableNegative102874 - 10434955243.6

Displaying genes 261 – 270 of 4329 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.