Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug/metabolite transporter (dmt)-like permease | DFR47_104174 | Not Available | Negative | 2688017 - 2688934 | 32704.8 |
| transcription elongation factor grea | DFR47_104175 | Not Available | Positive | 2689641 - 2690114 | 17468.4 |
| mannosyltransferase | DFR47_104176 | Not Available | Positive | 2690118 - 2691197 | 40149.6 |
| asnc family transcriptional regulator | DFR47_104177 | Not Available | Negative | 2691349 - 2691819 | 17394.1 |
| trk system potassium uptake protein trkh | DFR47_104178 | Not Available | Negative | 2692072 - 2693472 | 50129.3 |
| thioredoxin reductase (nadph) | DFR47_104179 | Not Available | Positive | 2693881 - 2694840 | 33956.7 |
| lysr family transcriptional regulator | DFR47_104180 | Not Available | Positive | 2695085 - 2695990 | 33925.8 |
| aspartate aminotransferase | DFR47_104181 | Not Available | Negative | 2696541 - 2697743 | 43304.0 |
| putative cold-shock dna-binding protein | DFR47_104182 | Not Available | Negative | 2698212 - 2698421 | 7519.84 |
| carbamoyl-phosphate synthase large subunit | DFR47_104183 | Not Available | Negative | 2698832 - 2702323 | 126537.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
