Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-oxo-dgtp pyrophosphatase mutt (nudix family) | DFR47_104134 | Not Available | Positive | 2647110 - 2647751 | 23679.2 |
| poly(a) polymerase/trna nucleotidyltransferase (cca-adding enzyme) | DFR47_104135 | Not Available | Positive | 2647763 - 2649013 | 45630.8 |
| beta-lactamase class d | DFR47_104136 | Not Available | Positive | 2649101 - 2649910 | 29842.9 |
| coproporphyrinogen oxidase | DFR47_104137 | Not Available | Negative | 2649947 - 2650861 | 34850.0 |
| hypothetical protein | DFR47_104138 | Not Available | Positive | 2651196 - 2651456 | 10013.0 |
| trna (cytidine/uridine-2'-o-)-methyltransferase | DFR47_104139 | Not Available | Negative | 2651680 - 2652072 | 14523.3 |
| atp-binding cassette subfamily b multidrug efflux pump | DFR47_104140 | Not Available | Positive | 2652806 - 2654671 | 69834.3 |
| atp-binding cassette subfamily b multidrug efflux pump | DFR47_104141 | Not Available | Positive | 2654894 - 2656771 | 69411.8 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | DFR47_104142 | Not Available | Positive | 2657350 - 2657913 | 19835.5 |
| ubiquinol-cytochrome c reductase cytochrome b subunit | DFR47_104143 | Not Available | Positive | 2657934 - 2659211 | 47844.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
