Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein virb3 | DFR47_10434 | Not Available | Positive | 2517556 - 2517837 | 9834.27 |
| type iv secretion system protein virb4 | DFR47_10435 | Not Available | Positive | 2517848 - 2520355 | 91646.3 |
| p-type conjugative transfer protein trbj | DFR47_10436 | Not Available | Positive | 2520352 - 2521134 | 28047.4 |
| conjugative transfer region protein trbk | DFR47_10437 | Not Available | Positive | 2521155 - 2521442 | 10150.1 |
| type iv secretion system protein trbl | DFR47_10438 | Not Available | Positive | 2521446 - 2522807 | 44471.8 |
| type iv secretion system protein virb5 | DFR47_10439 | Not Available | Positive | 2522804 - 2523493 | 25769.4 |
| type iv secretion system protein virb9 | DFR47_10440 | Not Available | Positive | 2523490 - 2524503 | 36537.7 |
| type iv secretion system protein virb10 | DFR47_10441 | Not Available | Positive | 2524500 - 2525633 | 40320.3 |
| hypothetical protein | DFR47_10442 | Not Available | Positive | 2525636 - 2525857 | 8098.0 |
| tetr family transcriptional regulator | DFR47_10443 | Not Available | Negative | 2525852 - 2526481 | 23583.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
