Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxygluconate permease | DFR47_103540 | Not Available | Positive | 2471891 - 2472976 | 37644.5 |
| lactaldehyde dehydrogenase | DFR47_103541 | Not Available | Positive | 2473043 - 2474503 | 52716.0 |
| l-lactate dehydrogenase (cytochrome) | DFR47_103542 | Not Available | Positive | 2474575 - 2475720 | 42438.2 |
| hydroxypyruvate isomerase | DFR47_103543 | Not Available | Positive | 2475749 - 2476513 | 28398.0 |
| putative mfs family arabinose efflux permease | DFR47_103544 | Not Available | Negative | 2476540 - 2477838 | 46179.8 |
| l,d-transpeptidase-like protein | DFR47_103545 | Not Available | Negative | 2478299 - 2478814 | 18916.3 |
| uncharacterized protein duf3829 | DFR47_103546 | Not Available | Negative | 2478909 - 2479940 | 37944.2 |
| dna polymerase-3 subunit epsilon | DFR47_103547 | Not Available | Positive | 2480286 - 2481269 | 36626.8 |
| dha1 family inner membrane transport protein | DFR47_103548 | Not Available | Negative | 2481456 - 2482673 | 41206.4 |
| diketogulonate reductase-like aldo/keto reductase | DFR47_103549 | Not Available | Negative | 2482686 - 2483510 | 29780.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
