Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter substrate-binding protein (haat family) | DFR47_103530 | Not Available | Positive | 2460763 - 2461914 | 42364.6 |
| amir/nast family two-component response regulator | DFR47_103531 | Not Available | Positive | 2461914 - 2462522 | 22200.8 |
| peptide/nickel transport system permease protein | DFR47_103532 | Not Available | Positive | 2462497 - 2463396 | 32223.9 |
| peptide/nickel transport system permease protein | DFR47_103533 | Not Available | Positive | 2463396 - 2464316 | 33208.0 |
| peptide/nickel transport system substrate-binding protein/oligopeptide transport system substrate-binding protein | DFR47_103534 | Not Available | Positive | 2464340 - 2465968 | 58704.8 |
| amidase | DFR47_103535 | Not Available | Positive | 2465975 - 2466934 | 34132.7 |
| peptide/nickel transport system atp-binding protein | DFR47_103536 | Not Available | Positive | 2466931 - 2468700 | 64330.8 |
| lysr family transcriptional regulator | DFR47_103537 | Not Available | Negative | 2468722 - 2469642 | 34519.5 |
| putative homoserine dehydrogenase-like protein | DFR47_103538 | Not Available | Positive | 2469766 - 2471112 | 48227.6 |
| hypothetical protein | DFR47_103539 | Not Available | Positive | 2471199 - 2471819 | 22837.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
