Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf930 | DFR47_103409 | Not Available | Negative | 2314565 - 2315359 | 29674.8 |
| methylisocitrate lyase | DFR47_103410 | Not Available | Negative | 2315525 - 2316436 | 32966.9 |
| 2-methylcitrate synthase | DFR47_103411 | Not Available | Negative | 2316460 - 2317644 | 43044.8 |
| 2-methylcitrate dehydratase | DFR47_103412 | Not Available | Negative | 2317774 - 2319288 | 55664.1 |
| xre family transcriptional regulator | DFR47_103413 | Not Available | Positive | 2319568 - 2320989 | 53699.7 |
| hypothetical protein | DFR47_103414 | Not Available | Positive | 2321145 - 2322134 | 34283.0 |
| trap transporter 4tm/12tm fusion protein | DFR47_103415 | Not Available | Positive | 2322289 - 2324337 | 72818.5 |
| lysr family transcriptional regulator | DFR47_103416 | Not Available | Negative | 2324370 - 2325287 | 34409.9 |
| cubico group peptidase (beta-lactamase class c family) | DFR47_103417 | Not Available | Negative | 2325465 - 2326964 | 54093.5 |
| peptide/nickel transport system atp-binding protein | DFR47_103418 | Not Available | Negative | 2327055 - 2327795 | 27181.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
