Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter membrane protein (cut2 family) | DFR47_103279 | Not Available | Positive | 2172832 - 2173845 | 35268.4 |
| monosaccharide abc transporter substrate-binding protein (cut2 family) | DFR47_103280 | Not Available | Positive | 2173949 - 2174890 | 33831.5 |
| xylulokinase | DFR47_103281 | Not Available | Positive | 2174957 - 2176417 | 51836.7 |
| amino acid abc transporter substrate-binding protein (paat family) | DFR47_103282 | Not Available | Negative | 2176732 - 2177562 | 29481.5 |
| polar amino acid transport system permease protein | DFR47_103283 | Not Available | Negative | 2177586 - 2178239 | 23270.3 |
| amino acid abc transporter membrane protein 1 (paat family) | DFR47_103284 | Not Available | Negative | 2178236 - 2178877 | 23331.6 |
| amino acid abc transporter atp-binding protein (paat family) | DFR47_103285 | Not Available | Negative | 2178877 - 2179647 | 28359.6 |
| lysr family glycine cleavage system transcriptional activator | DFR47_103286 | Not Available | Negative | 2179939 - 2180892 | 36107.0 |
| glycine/d-amino acid oxidase-like deaminating enzyme | DFR47_103287 | Not Available | Negative | 2180974 - 2182179 | 44207.1 |
| uronate dehydrogenase | DFR47_103288 | Not Available | Negative | 2182176 - 2182988 | 30181.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
