Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | DFR47_103269 | Not Available | Positive | 2160777 - 2161955 | 42202.7 |
| 4-hydroxybenzoyl-coa thioesterase | DFR47_103270 | Not Available | Positive | 2161965 - 2162381 | 15329.3 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | DFR47_103271 | Not Available | Positive | 2162374 - 2162769 | 14627.5 |
| short chain enoyl-coa hydratase /3-hydroxyacyl-coa dehydrogenase | DFR47_103272 | Not Available | Positive | 2162781 - 2164787 | 71626.5 |
| 3-oxoadipyl-coa thiolase | DFR47_103273 | Not Available | Positive | 2164784 - 2165989 | 41968.4 |
| putative nbd/hsp70 family sugar kinase | DFR47_103274 | Not Available | Positive | 2166239 - 2167564 | 47598.2 |
| d-xylose isomerase | DFR47_103275 | Not Available | Positive | 2167561 - 2168871 | 49007.9 |
| sugar phosphate isomerase/epimerase | DFR47_103276 | Not Available | Positive | 2169023 - 2170075 | 39336.9 |
| putative dehydrogenase | DFR47_103277 | Not Available | Positive | 2170104 - 2171264 | 41623.1 |
| monosaccharide abc transporter atp-binding protein (cut2 family) | DFR47_103278 | Not Available | Positive | 2171246 - 2172835 | 57406.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
