Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase/aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | DFR47_103249 | Not Available | Positive | 2136372 - 2137859 | 52818.9 |
| cytosine permease | DFR47_103250 | Not Available | Positive | 2137937 - 2139271 | 47719.7 |
| paib family negative transcriptional regulator | DFR47_103251 | Not Available | Negative | 2139398 - 2140015 | 23587.3 |
| amidase | DFR47_103252 | Not Available | Negative | 2140029 - 2141480 | 51773.5 |
| peptide/nickel transport system substrate-binding protein | DFR47_103253 | Not Available | Negative | 2141541 - 2143097 | 57435.2 |
| esterase/phb depolymerase | DFR47_103254 | Not Available | Negative | 2143122 - 2143973 | 32404.6 |
| peptide/nickel transport system atp-binding protein | DFR47_103255 | Not Available | Negative | 2143997 - 2145631 | 59805.8 |
| peptide/nickel transport system permease protein | DFR47_103256 | Not Available | Negative | 2145628 - 2146446 | 29155.7 |
| peptide/nickel transport system permease protein | DFR47_103257 | Not Available | Negative | 2146443 - 2147387 | 34043.0 |
| acyl-coa:6-aminopenicillanic acid acyl transferase | DFR47_103258 | Not Available | Negative | 2147392 - 2148558 | 42595.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
