Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase (b12-independent) | DFR47_103239 | Not Available | Positive | 2125759 - 2126787 | 38478.0 |
| flavin reductase | DFR47_103240 | Not Available | Positive | 2126976 - 2127482 | 18469.0 |
| gntr family transcriptional regulator | DFR47_103241 | Not Available | Negative | 2127574 - 2128248 | 25396.0 |
| putative spermidine/putrescine transport system substrate-binding protein | DFR47_103242 | Not Available | Positive | 2128614 - 2129663 | 38599.4 |
| putative spermidine/putrescine transport system atp-binding protein | DFR47_103243 | Not Available | Positive | 2129757 - 2130821 | 39043.2 |
| putative spermidine/putrescine transport system permease protein | DFR47_103244 | Not Available | Positive | 2130818 - 2131987 | 42169.7 |
| putative spermidine/putrescine transport system permease protein | DFR47_103245 | Not Available | Positive | 2131987 - 2132769 | 27674.9 |
| l-lactate dehydrogenase (cytochrome) | DFR47_103246 | Not Available | Positive | 2132851 - 2134110 | 45950.6 |
| ornithine cyclodeaminase | DFR47_103247 | Not Available | Positive | 2134123 - 2135085 | 33979.6 |
| regulatory luxr family protein | DFR47_103248 | Not Available | Positive | 2135261 - 2136253 | 36666.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
