Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter membrane protein 2 (cut1 family) | DFR47_103158 | Not Available | Negative | 2010970 - 2011821 | 31983.9 |
| carbohydrate abc transporter membrane protein 1 (cut1 family) | DFR47_103159 | Not Available | Negative | 2011818 - 2012741 | 35296.9 |
| carbohydrate abc transporter substrate-binding protein (cut1 family) | DFR47_103160 | Not Available | Negative | 2012937 - 2014184 | 46317.0 |
| putative nbd/hsp70 family sugar kinase | DFR47_103161 | Not Available | Positive | 2014480 - 2015694 | 42759.8 |
| lmbe family n-acetylglucosaminyl deacetylase | DFR47_103162 | Not Available | Positive | 2015724 - 2018135 | 88273.7 |
| putative fmn-dependent luciferase-like monooxygenase | DFR47_103163 | Not Available | Positive | 2018268 - 2019395 | 42229.1 |
| fmn reductase | DFR47_103164 | Not Available | Positive | 2019459 - 2020130 | 23403.1 |
| hypothetical protein | DFR47_103165 | Not Available | Positive | 2020171 - 2020494 | 11923.3 |
| co/xanthine dehydrogenase mo-binding subunit | DFR47_103166 | Not Available | Positive | 2021073 - 2023829 | 100677.0 |
| aerobic-type carbon monoxide dehydrogenase small subunit (coxs/cuts family) | DFR47_103167 | Not Available | Positive | 2023826 - 2024365 | 19768.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
