Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | DFR47_103148 | Not Available | Positive | 2001495 - 2002382 | 31320.5 |
| amino acid abc transporter atp-binding protein (paat family) | DFR47_103149 | Not Available | Positive | 2002624 - 2003370 | 27002.8 |
| amino acid abc transporter substrate-binding protein (paat family) | DFR47_103150 | Not Available | Positive | 2003464 - 2004273 | 29370.4 |
| polar amino acid transport system permease protein | DFR47_103151 | Not Available | Positive | 2004415 - 2005113 | 25592.0 |
| amino acid abc transporter membrane protein 2 (paat family) | DFR47_103152 | Not Available | Positive | 2005115 - 2005804 | 25760.0 |
| hypothetical protein | DFR47_103153 | Not Available | Negative | 2005948 - 2006202 | 9596.66 |
| putative glutamine amidotransferase | DFR47_103154 | Not Available | Positive | 2006583 - 2007341 | 27056.3 |
| sugar/nucleoside kinase (ribokinase family) | DFR47_103155 | Not Available | Negative | 2007500 - 2008402 | 31106.9 |
| carbohydrate abc transporter atp-binding protein (cut1 family) | DFR47_103156 | Not Available | Negative | 2008399 - 2009445 | 37898.9 |
| argininosuccinate lyase | DFR47_103157 | Not Available | Negative | 2009445 - 2010959 | 55948.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
