Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter membrane protein 1 (paat family) | DFR47_10388 | Not Available | Positive | 1931845 - 1932528 | 25033.3 |
| polar amino acid transport system permease protein | DFR47_10389 | Not Available | Positive | 1932525 - 1933172 | 23757.9 |
| amino acid abc transporter atp-binding protein (paat family) | DFR47_10390 | Not Available | Positive | 1933189 - 1933956 | 27871.2 |
| gntr family transcriptional regulator | DFR47_10391 | Not Available | Positive | 1934038 - 1934706 | 24511.1 |
| ornithine cyclodeaminase | DFR47_10392 | Not Available | Positive | 1934769 - 1935743 | 34223.8 |
| type iv secretory pathway virj component | DFR47_10393 | Not Available | Negative | 1935928 - 1937337 | 50527.3 |
| phosphatidylglycerol lysyltransferase | DFR47_10394 | Not Available | Negative | 1937334 - 1939979 | 97129.3 |
| oligopeptide transport system substrate-binding protein | DFR47_10395 | Not Available | Negative | 1940311 - 1941900 | 59262.7 |
| iron(iii) transport system substrate-binding protein | DFR47_10396 | Not Available | Negative | 1942141 - 1943238 | 40913.6 |
| two-component system sensor histidine kinase tcte | DFR47_10397 | Not Available | Negative | 1943235 - 1944626 | 50858.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
