Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cold-shock dna-binding protein | DFR47_10358 | Not Available | Negative | 1898967 - 1899176 | 7535.85 |
| ni/co efflux regulator rcnb | DFR47_10359 | Not Available | Negative | 1899533 - 1899880 | 13673.4 |
| iclr family transcriptional regulator | DFR47_10360 | Not Available | Negative | 1900230 - 1900988 | 27645.2 |
| peptide/nickel transport system permease protein | DFR47_10361 | Not Available | Positive | 1901203 - 1902144 | 33973.0 |
| peptide/nickel transport system permease protein | DFR47_10362 | Not Available | Positive | 1902141 - 1903016 | 31440.3 |
| peptide/nickel transport system atp-binding protein | DFR47_10363 | Not Available | Positive | 1903016 - 1904800 | 64767.1 |
| 2-methylcitrate dehydratase prpd | DFR47_10364 | Not Available | Positive | 1904832 - 1906157 | 46656.7 |
| peptide/nickel transport system substrate-binding protein | DFR47_10365 | Not Available | Positive | 1906175 - 1907737 | 56971.8 |
| glycine/d-amino acid oxidase-like deaminating enzyme | DFR47_10366 | Not Available | Positive | 1907838 - 1909079 | 45741.7 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | DFR47_10367 | Not Available | Positive | 1909096 - 1909464 | 13708.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
