Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sos response-associated peptidase yedk | DFR47_1038 | Not Available | Negative | 1852501 - 1853130 | 23640.1 |
| uncharacterized protein yjbj (upf0337 family) | DFR47_1039 | Not Available | Negative | 1853227 - 1853430 | 8286.57 |
| hypothetical protein | DFR47_10310 | Not Available | Positive | 1853769 - 1854737 | 35201.7 |
| low affinity fe/cu permease | DFR47_10311 | Not Available | Negative | 1855086 - 1855460 | 14213.2 |
| ypeb-like protein with putative protease inhibitory function | DFR47_10312 | Not Available | Positive | 1855575 - 1855916 | 11911.0 |
| hypothetical protein | DFR47_10313 | Not Available | Positive | 1855935 - 1856513 | 19675.2 |
| ferritin-like metal-binding protein ycie | DFR47_10314 | Not Available | Positive | 1856591 - 1857064 | 17767.5 |
| hypothetical protein | DFR47_10315 | Not Available | Negative | 1857133 - 1857360 | 8357.98 |
| hypothetical protein | DFR47_10316 | Not Available | Negative | 1857460 - 1857777 | 11089.7 |
| hypothetical protein | DFR47_10317 | Not Available | Negative | 1857840 - 1858007 | 6268.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
