Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide export system protein lpta | DFR47_102348 | Not Available | Negative | 1386522 - 1387184 | 22517.2 |
| lipopolysaccharide export system protein lptc | DFR47_102349 | Not Available | Negative | 1387476 - 1388141 | 23616.2 |
| signal peptide peptidase a | DFR47_102350 | Not Available | Positive | 1388472 - 1389449 | 35628.2 |
| integration host factor subunit beta | DFR47_102351 | Not Available | Positive | 1389724 - 1390011 | 10710.7 |
| uncharacterized protein duf1049 | DFR47_102352 | Not Available | Positive | 1390217 - 1390543 | 11432.4 |
| ornithine cyclodeaminase | DFR47_102353 | Not Available | Positive | 1390780 - 1391754 | 34952.1 |
| 23s rrna (cytosine1962-c5)-methyltransferase | DFR47_102354 | Not Available | Positive | 1391940 - 1393112 | 43498.7 |
| trmh family rna methyltransferase | DFR47_102355 | Not Available | Positive | 1393109 - 1393972 | 31700.5 |
| signal peptidase ii | DFR47_102356 | Not Available | Positive | 1394001 - 1394483 | 17925.0 |
| ornithine-acyl[acyl carrier protein] n-acyltransferase | DFR47_102357 | Not Available | Positive | 1394745 - 1395662 | 34383.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
