Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system atp-binding protein | DFR47_102198 | Not Available | Positive | 1215588 - 1216607 | 37130.0 |
| peptide/nickel transport system permease protein | DFR47_102199 | Not Available | Positive | 1216620 - 1217549 | 33396.1 |
| peptide/nickel transport system permease protein | DFR47_102200 | Not Available | Positive | 1217562 - 1218437 | 31888.9 |
| glycerophosphoryl diester phosphodiesterase | DFR47_102201 | Not Available | Positive | 1218452 - 1219168 | 26760.9 |
| (s)-ureidoglycine aminohydrolase | DFR47_102202 | Not Available | Positive | 1219328 - 1220152 | 30988.9 |
| agcs family alanine or glycine:cation symporter | DFR47_102203 | Not Available | Positive | 1220413 - 1221810 | 49484.3 |
| oligopeptide transport system atp-binding protein | DFR47_102204 | Not Available | Negative | 1221925 - 1223004 | 39442.1 |
| peptide/nickel transport system atp-binding protein/oligopeptide transport system atp-binding protein | DFR47_102205 | Not Available | Negative | 1223001 - 1223981 | 35930.1 |
| cytosine/adenosine deaminase-related metal-dependent hydrolase | DFR47_102206 | Not Available | Negative | 1224070 - 1225506 | 52810.8 |
| peptide/nickel transport system substrate-binding protein/dipeptide transport system substrate-binding protein | DFR47_102207 | Not Available | Negative | 1225583 - 1227175 | 58964.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
