Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system substrate-binding protein | DFR47_102148 | Not Available | Negative | 1158771 - 1159823 | 37715.1 |
| sarcosine oxidase subunit beta | DFR47_102149 | Not Available | Negative | 1159872 - 1160999 | 40058.8 |
| hypothetical protein | DFR47_102150 | Not Available | Negative | 1160996 - 1162417 | 50758.5 |
| 2fe-2s iron-sulfur cluster protein | DFR47_102151 | Not Available | Negative | 1162420 - 1162746 | 11724.9 |
| putative spermidine/putrescine transport system permease protein | DFR47_102152 | Not Available | Negative | 1162752 - 1163546 | 28813.2 |
| putative spermidine/putrescine transport system permease protein | DFR47_102153 | Not Available | Negative | 1163551 - 1164432 | 32146.6 |
| putative spermidine/putrescine transport system atp-binding protein | DFR47_102154 | Not Available | Negative | 1164435 - 1165484 | 38134.0 |
| iclr family transcriptional regulator | DFR47_102155 | Not Available | Positive | 1165758 - 1166573 | 29795.2 |
| lysr family transcriptional regulator | DFR47_102156 | Not Available | Negative | 1166581 - 1167492 | 34078.1 |
| amino acid abc transporter substrate-binding protein (paat family) | DFR47_102157 | Not Available | Positive | 1167734 - 1168528 | 29067.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
