Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-methylhydantoinase b | DFR47_10218 | Not Available | Negative | 1000577 - 1002391 | 66241.1 |
| n-methylhydantoinase a | DFR47_10219 | Not Available | Negative | 1002414 - 1004507 | 75470.6 |
| putative spermidine/putrescine transport system atp-binding protein | DFR47_10220 | Not Available | Negative | 1004598 - 1005704 | 39950.5 |
| putative spermidine/putrescine transport system permease protein | DFR47_10221 | Not Available | Negative | 1005732 - 1006538 | 28910.1 |
| putative spermidine/putrescine transport system permease protein | DFR47_10222 | Not Available | Negative | 1006596 - 1007534 | 33915.1 |
| putative spermidine/putrescine transport system substrate-binding protein | DFR47_10223 | Not Available | Negative | 1007618 - 1008697 | 40035.8 |
| n-carbamoylsarcosine amidase | DFR47_10224 | Not Available | Negative | 1008757 - 1009479 | 26481.5 |
| dna-binding transcriptional lysr family regulator | DFR47_10225 | Not Available | Positive | 1009644 - 1010642 | 37620.5 |
| gntr family transcriptional repressor for pyruvate dehydrogenase complex | DFR47_10226 | Not Available | Negative | 1010928 - 1011617 | 25488.6 |
| amino acid abc transporter substrate-binding protein (paat family) | DFR47_10227 | Not Available | Positive | 1011858 - 1012661 | 29041.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
