Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general l-amino acid transport system substrate-binding protein | DFR47_1028 | Not Available | Positive | 991100 - 992125 | 36124.8 |
| dual specificity protein phosphatase-like protein | DFR47_1029 | Not Available | Positive | 992173 - 992736 | 21100.4 |
| dna-binding gntr family transcriptional regulator | DFR47_10210 | Not Available | Positive | 992714 - 993400 | 25784.0 |
| protein-tyrosine phosphatase | DFR47_10211 | Not Available | Positive | 993397 - 993930 | 19418.4 |
| his/glu/gln/arg/opine family amino acid abc transporter permease subunit | DFR47_10212 | Not Available | Positive | 993935 - 995014 | 38822.4 |
| integrase/recombinase xerd | DFR47_10213 | Not Available | Positive | 995118 - 995696 | 21178.9 |
| uncharacterized protein duf3768 | DFR47_10214 | Not Available | Positive | 995760 - 996122 | 13843.6 |
| hypothetical protein | DFR47_10215 | Not Available | Positive | 996125 - 996748 | 22983.8 |
| hypothetical protein | DFR47_10216 | Not Available | Positive | 997402 - 998235 | 32297.8 |
| ncs1 family nucleobase:cation symporter-1 | DFR47_10217 | Not Available | Negative | 998879 - 1000387 | 54717.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
