Methanocella arvoryzae MRE50

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanocellales

Family

Methanocellaceae

Genus

Methanocella

Description

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanocellales
FamilyMethanocellaceae
GenusMethanocella
SpeciesMethanocella arvoryzae
StrainMRE50

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanocella arvoryzae MRE50, complete sequence.

Gene Summary

Adenine Count

717692 bp

Thymine Count

725896 bp

Guanine Count

867422 bp

Cytosine Count

868906 bp

Genome Length

3179916 bp

Protein-coding Genes

3136 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate dehydrogenase accessory sulfurtransferase fdhdRCI_RS11070O27590Negative2236158 - 223691027759.5
tfx family dna-binding proteinRCI_RS11075Q57637Positive2236961 - 223737115459.0
duf1786 domain-containing proteinRCI_RS11080Not AvailablePositive2237368 - 223839037229.3
arginine--trna ligaseRCI_RS11085Q0W6L7Negative2239077 - 224076863247.1
peptide chain release factor arf-1RCI_RS11090Q12V98Negative2240784 - 224203746761.9
rnase j family beta-casp ribonucleaseRCI_RS11095Not AvailableNegative2242874 - 224421149688.4
5,10-methylenetetrahydromethanopterin reductaseRCI_RS11100Q58929Negative2244600 - 224557134216.5
deoxyribose-phosphate aldolaseRCI_RS11105Q0W6M2Negative2245740 - 224641424208.8
ompl47-type beta-barrel domain-containing proteinRCI_RS17060Not AvailableNegative2246500 - 2249637110480.0
tetratricopeptide repeat proteinRCI_RS11115Not AvailableNegative2249900 - 225100640934.7

Displaying genes 2271 – 2280 of 3198 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

139 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000515mycothioneC34H58N4O24S2Chemical structure of mycothioneNot available
Average970.96Da
Monoisotopic970.2882411Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da

Displaying 1–10 of 139 metabolites

Health Effects

No health effects information available for this bacterium.