Methanocella arvoryzae MRE50

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanocellales

Family

Methanocellaceae

Genus

Methanocella

Description

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanocellales
FamilyMethanocellaceae
GenusMethanocella
SpeciesMethanocella arvoryzae
StrainMRE50

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanocella arvoryzae MRE50, complete sequence.

Gene Summary

Adenine Count

717692 bp

Thymine Count

725896 bp

Guanine Count

867422 bp

Cytosine Count

868906 bp

Genome Length

3179916 bp

Protein-coding Genes

3136 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseRCI_RS09070Not AvailableNegative1830520 - 183122726067.2
abc transporter atp-binding proteinRCI_RS09075P9WQL6Negative1831224 - 183207831877.4
tetr/acrr family transcriptional regulatorRCI_RS15835Not AvailablePositive1832205 - 183284023823.0
p-loop ntpase fold proteinRCI_RS09085Not AvailableNegative1832862 - 183408546725.7
yhfc family glutamic-type intramembrane proteaseRCI_RS09090Not AvailableNegative1834361 - 183514028058.5
duf3887 domain-containing proteinRCI_RS09095Not AvailableNegative1835158 - 183557715409.2
hypothetical proteinRCI_RS09100Not AvailablePositive1835695 - 18358807268.7
helix-turn-helix domain-containing proteinRCI_RS09105Not AvailableNegative1836125 - 183655316124.0
glycosyltransferaseRCI_RS09110Not AvailablePositive1836843 - 183804544132.0
sjogren's syndrome/scleroderma autoantigen 1 family proteinRCI_RS09115Not AvailableNegative1838054 - 183849416316.0

Displaying genes 1861 – 1870 of 3198 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

139 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000515mycothioneC34H58N4O24S2Chemical structure of mycothioneNot available
Average970.96Da
Monoisotopic970.2882411Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da

Displaying 1–10 of 139 metabolites

Health Effects

No health effects information available for this bacterium.