Salegentibacter agarivorans

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Salegentibacter

Description

Salegentibacter agarivorans is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions, with an optimal growth temperature of 29.0°C. As a non-spore-forming organism, it relies on other survival mechanisms to endure environmental stressors. The organism is characterized by its unique adaptation to marine environments, particularly in relation to its agar-degrading capabilities, which suggests a specialized role in the degradation of algal biomass in coastal ecosystems. The morphology and growth requirements of S. agarivorans indicate its potential importance in nutrient cycling within marine habitats, especially considering its ability to utilize agar as a carbon source. This metabolic feature may facilitate the breakdown of complex polysaccharides found in algal cell walls, thereby contributing to the turnover of organic matter and supporting the overall health of marine food webs. The study of Salegentibacter agarivorans may provide valuable insights into the microbial ecology of marine environments, particularly regarding the interactions between microorganisms and the organic substrates derived from algal blooms.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSalegentibacter
SpeciesSalegentibacter agarivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salegentibacter agarivorans strain DSM 23515 genome assembly,

Gene Summary

Adenine Count

1361495 bp

Thymine Count

1353666 bp

Guanine Count

792200 bp

Cytosine Count

790785 bp

Genome Length

4298571 bp

Protein-coding Genes

3769 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04488033_10388Not AvailablePositive849600 - 85074842462.9
prephenate dehydrogenaseSAMN04488033_10389Not AvailablePositive850745 - 85159331605.8
3-deoxy-d-arabinoheptulosonate-7-phosphate synthaseSAMN04488033_10390Not AvailablePositive851617 - 85269940696.8
ribosome biogenesis gtpaseSAMN04488033_10391Not AvailablePositive852941 - 85389135867.9
d-tyrosyl-trna(tyr) deacylaseSAMN04488033_10392Not AvailablePositive853888 - 85434016687.2
ntp pyrophosphatase, house-cleaning of non-canonical ntpsSAMN04488033_10393Not AvailablePositive854343 - 85466912526.6
hypothetical proteinSAMN04488033_10394Not AvailablePositive854669 - 85493210264.6
3-phosphoshikimate 1-carboxyvinyltransferaseSAMN04488033_10395Not AvailablePositive854945 - 85617445563.8
s-adenosylmethionine--trna ribosyltransferase-isomeraseSAMN04488033_10396Not AvailablePositive856256 - 85731140555.6
23s rrna m(2)a-2503 methyltransferaseSAMN04488033_10397Not AvailablePositive857512 - 85855539444.3

Displaying genes 761 – 770 of 3813 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.