Sphingomonas dokdonensis str. DSM 21029

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas dokdonensis
StrainDSM 21029

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas dokdonensis str. DSM 21029
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas dokdonensis strain DSM 21029 SPDO_contig000016, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3256 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
patatin-like phospholipaseSPDO_06530Not AvailableNegative702356 - 70464183331.7
endonuclease/exonuclease/phosphatase family proteinSPDO_06540Not AvailableNegative704638 - 70533325545.9
hypothetical proteinSPDO_06550Not AvailablePositive705458 - 7057039734.82
tyrosine--trna ligaseSPDO_06560Not AvailableNegative705752 - 70699345571.5
murein hydrolase activator nlpd precursorSPDO_06570Not AvailableNegative707113 - 70817437455.7
serine--trna ligaseSPDO_06580Not AvailableNegative708196 - 70947347010.1
protein required for attachment to host cellsSPDO_06590Not AvailablePositive709569 - 71007818118.1
hypothetical proteinSPDO_06600Not AvailableNegative710139 - 71089425191.8
rna polymerase-binding transcription factor dksaSPDO_06610Not AvailablePositive711295 - 71175617562.4
pilz domain proteinSPDO_06620Not AvailablePositive711819 - 71219312968.4

Displaying genes 691 – 700 of 3330 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.