Paramagnetospirillum magneticum AMB-1

Gram-negativeSpirillaMotileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Magnetospirillaceae

Genus

Paramagnetospirillum

Description

Paramagnetospirillum magneticum AMB-1 is a Gram-negative, microaerophilic bacterium characterized by its distinctive spirilla shape and heterotrophic mode of energy acquisition. This organism predominantly inhabits aquatic environments, where it plays a role in the microbial community dynamics. As a microaerophile, P. magneticum AMB-1 requires reduced oxygen levels for optimal growth, which is typical for certain bacteria that thrive in specific niches within water bodies, such as sediments or stratified waters. The unique morphology of P. magneticum AMB-1, coupled with its ability to utilize organic compounds as an energy source, positions it as a significant player in biogeochemical cycles, particularly in the breakdown of organic matter in aquatic ecosystems. Additionally, its adaptation to microaerophilic conditions suggests a specialized ecological role in environments where oxygen concentrations fluctuate, allowing it to compete effectively with other microbial populations. This bacterium is noteworthy for its potential applications in biotechnology and environmental microbiology, as its metabolic capabilities may be leveraged for bioremediation or bioenergy production. Understanding the ecological functions of P. magneticum AMB-1 can provide insights into microbial interactions and the overall health of aquatic ecosystems, highlighting the importance of such microorganisms in maintaining ecological balance and nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyMagnetospirillaceae
GenusParamagnetospirillum
SpeciesParamagnetospirillum magneticum
StrainAMB-1

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Paramagnetospirillum magneticum AMB-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Paramagnetospirillum magneticum AMB-1, complete sequence.

Gene Summary

Adenine Count

869848 bp

Thymine Count

863976 bp

Guanine Count

1611991 bp

Cytosine Count

1621300 bp

Genome Length

4967148 bp

Protein-coding Genes

4635 genes

Non-Coding Genes

132 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAMB_RS02175Not AvailableNegative456310 - 45704727497.7
double-strand break repair protein addbAMB_RS02180Q4ULU8Positive457207 - 460125105402.0
trap transporter substrate-binding protein dctpAMB_RS02185Q21XD7Positive460285 - 46131336880.4
trap transporter large permease subunitAMB_RS02190Not AvailablePositive461315 - 46327068954.1
abc transporter substrate-binding proteinAMB_RS02195Not AvailableNegative463311 - 46556082640.0
duf6159 family proteinAMB_RS02200Not AvailableNegative465580 - 46645530513.4
tigr00645 family proteinAMB_RS02205P57929Negative466517 - 46711622292.4
duf2786 domain-containing proteinAMB_RS02210Not AvailableNegative467281 - 46796725546.5
myg1 family proteinAMB_RS02215Q9P7T6Negative467975 - 46885931078.6
Trna-leuNot AvailableNot AvailablePositive468938 - 469023Not Available

Displaying genes 581 – 590 of 4767 in total

Metabolites

1957 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 1957 metabolites

Health Effects

No health effects information available for this bacterium.