Sphingobacterium sp.

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangepsychrotolerant
HabitatArtic soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Sphingobacterium sp. isolate UBA11116 contig_2591,

Gene Summary

Adenine Count

1480427 bp

Thymine Count

1481876 bp

Guanine Count

979165 bp

Cytosine Count

987900 bp

Genome Length

4972052 bp

Protein-coding Genes

4507 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide-methionine (s)-s-oxide reductaseDCW66_02430Not AvailablePositive508618 - 50913319717.9
is481 family transposaseDCW66_02435Not AvailableNegative509187 - 51033244213.8
alcohol dehydrogenaseDCW66_02440Not AvailableNegative510569 - 51159436547.2
bacteriocin-protection proteinDCW66_02445Not AvailablePositive511814 - 5120388566.28
hypothetical proteinDCW66_02450Not AvailablePositive512385 - 51280716076.8
hydrophobe/amphiphile efflux-1 family rnd transporterDCW66_02460Not AvailablePositive514109 - 517270115300.0
gmc family oxidoreductaseDCW66_02465Not AvailablePositive517309 - 51771014811.5
susc/raga family tonb-linked outer membrane proteinDCW66_02470Not AvailablePositive518515 - 521559113110.0
ragb/susd family nutrient uptake outer membrane proteinDCW66_02475Not AvailablePositive521572 - 52316560277.2
alpha-1,6-mannanaseDCW66_02480Not AvailablePositive523429 - 52400022136.1

Displaying genes 471 – 480 of 13449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.