Sphingobacterium sp.

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangepsychrotolerant
HabitatArtic soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Sphingobacterium sp. isolate UBA11116 contig_2591,

Gene Summary

Adenine Count

1480427 bp

Thymine Count

1481876 bp

Guanine Count

979165 bp

Cytosine Count

987900 bp

Genome Length

4972052 bp

Protein-coding Genes

4507 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDCW66_00620Not AvailableNegative125715 - 12659934184.8
glycoside hydrolase family 25 proteinDCW66_00625Not AvailablePositive126667 - 12751533334.1
rhodanese-like domain-containing proteinDCW66_00630Not AvailablePositive127524 - 12825527140.6
thioredoxinDCW66_00635Not AvailablePositive128255 - 12855111193.7
smc-scp complex subunit scpbDCW66_00640Not AvailableNegative128955 - 12951521292.6
dehypoxanthine futalosine cyclaseDCW66_00645Not AvailableNegative129525 - 13064942763.5
tonb-dependent receptorDCW66_00650Not AvailablePositive131154 - 134384116992.0
ragb/susd family nutrient uptake outer membrane proteinDCW66_00655Not AvailablePositive134417 - 13613263162.0
peptidase s13DCW66_00660Not AvailablePositive136245 - 13757650887.0
mfs transporterDCW66_00665Not AvailablePositive137587 - 13888548182.2

Displaying genes 121 – 130 of 13449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.