Clostridium drakei str. SL1

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium drakei str. SL1 is a Gram-negative, rod-shaped bacterium that exhibits spore-forming capabilities and thrives in anaerobic environments, with an optimal growth temperature of 32.0°C. This microorganism belongs to the genus Clostridium, which is well-known for its anaerobic metabolism and ability to produce endospores, allowing it to survive in harsh conditions. The Gram-negative classification of C. drakei str. SL1 indicates a distinctive cell wall structure characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides. This structural feature may influence its interactions with the environment and other microorganisms. The rod shape of the bacterium suggests a potential for motility and adaptability within its ecological niche, although specific motility traits are not detailed. As a spore-forming organism, C. drakei str. SL1 can endure unfavorable conditions, entering a dormant state until environmental factors become favorable for growth and reproduction. This sporulation ability is particularly advantageous in anaerobic habitats, where competition for resources and fluctuating conditions can be prevalent. The optimal growth temperature of 32.0°C positions C. drakei str. SL1 within a range that may be typical for many soil and gut-associated microorganisms, suggesting it could play a role in nutrient cycling or contribute to the microbial diversity in anaerobic ecosystems. This adaptability to specific thermal and anaerobic conditions underscores its potential significance in ecological and biological contexts, particularly in environments where oxygen is limited.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium drakei
StrainSL1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium drakei strain SL1 chromosome, complete genome.

Gene Summary

Adenine Count

2009288 bp

Thymine Count

1996041 bp

Guanine Count

846621 bp

Cytosine Count

843291 bp

Genome Length

5695241 bp

Protein-coding Genes

4995 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha/beta hydrolaseB9W14_RS00290Not AvailableNegative56197 - 5718937553.1
vanw family proteinB9W14_RS00295Not AvailablePositive57465 - 5861343090.7
vanw family proteinB9W14_RS00300Not AvailablePositive58793 - 6026253874.5
Trna-leuNot AvailableNot AvailablePositive60620 - 60701Not Available
n-acetylmuramoyl-l-alanine amidaseB9W14_RS00310Not AvailablePositive60994 - 6174027997.9
trna (cytidine(34)-2'-o)-methyltransferaseB9W14_RS00315Not AvailablePositive62062 - 6252918190.7
degv family proteinB9W14_RS00320Not AvailablePositive62544 - 6338330853.6
glycine cleavage system aminomethyltransferase gcvtB9W14_RS00325Not AvailablePositive63728 - 6483441545.2
glycine cleavage system protein gcvhB9W14_RS00330Not AvailablePositive64899 - 6528214254.8
aminomethyl-transferring glycine dehydrogenase subunit gcvpaB9W14_RS00335Not AvailablePositive65284 - 6662449298.7

Displaying genes 111 – 120 of 5169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.