Sphingobium indicum str. DSM 26779

Gram-negativeRodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium indicum str. DSM 26779 is a Gram-negative, rod-shaped bacterium that thrives in terrestrial habitats under aerobic conditions, with an optimal growth temperature of 28.0°C. This microbe is part of the Sphingobium genus, which is characterized by its ability to degrade a variety of organic compounds, suggesting potential roles in bioremediation processes within its natural environment. The Gram-negative cell wall structure of Sphingobium indicum str. DSM 26779 is indicative of its resilience and adaptability, as this feature typically confers protection against certain environmental stresses. The rod shape may facilitate motility and nutrient uptake, enhancing its survival in soil ecosystems where competition for resources is high. Given its aerobic requirement, Sphingobium indicum str. DSM 26779 likely participates in various biochemical cycles, contributing to the degradation of organic matter and the cycling of carbon and nutrients in terrestrial environments. Its optimal growth temperature suggests a preference for temperate conditions, which may align with seasonal variations in its habitat, potentially influencing its metabolic activities during different times of the year. Overall, Sphingobium indicum str. DSM 26779 exemplifies the complex interactions within terrestrial microbial communities, where its metabolic capabilities may help mitigate environmental pollutants and maintain soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium indicum
StrainDSM 26779

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Sphingobium indicum str. DSM 26779
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature28
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium indicum strain DSM 26779

Gene Summary

Adenine Count

720925 bp

Thymine Count

719106 bp

Guanine Count

1363622 bp

Cytosine Count

1362234 bp

Genome Length

4167825 bp

Protein-coding Genes

3835 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEWH08_13455Not AvailablePositive2799264 - 280014232478.1
cytochrome cEWH08_13460Not AvailablePositive2800150 - 280197665429.5
phosphodiesteraseEWH08_13465Not AvailablePositive2802022 - 280286731406.4
lysr family transcriptional regulatorEWH08_13470Not AvailableNegative2802882 - 280381734358.4
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseEWH08_13475Not AvailablePositive2803959 - 280507139719.8
s-formylglutathione hydrolaseEWH08_13480Not AvailablePositive2805140 - 280599730584.1
gnat family n-acetyltransferaseEWH08_13485Not AvailablePositive2806126 - 280672822310.7
tetr/acrr family transcriptional regulatorEWH08_13490Not AvailableNegative2806751 - 280800146505.8
acyl-coa dehydrogenaseEWH08_13495Not AvailablePositive2808203 - 280944746236.3
phosphotransferase family proteinEWH08_13500Not AvailablePositive2809444 - 281048138531.3

Displaying genes 2661 – 2670 of 3906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.